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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4975136_4976476_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4975136 - 4976476

Intron Length:

1341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTTTTTTTCCA

Flanking Amino Acid:

AYCFNPSLSTWNLVSDKQDS

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

85.8

25.5

Major BPS

0.85

0.9

39.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

-0.9

2.9

43.6

Minor BPS

44.4

-0.4

3.6

74.12

37.8

Associated Gene:

Gene:

HIRA

Ensembl Gene ID:

ENSAPLG00000004150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004347

4953868 - 4979032

25165