Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_5010258_5011838_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5010258 - 5011838

Intron Length:

1581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

CCTCTGCGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

CCTCTGCGAACA

Flanking Amino Acid:

EKKKVDKLNAAHYSTGAVSA

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.61

69.1

38.5

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

62.5

0.28

57.3

37.5

Minor 5ss

41.8

-0.9

2.8

54.8

43.5

Minor BPS

39.3

-0.8

2.2

49.62

41.3

Associated Gene:

Gene:

PPIL2

Ensembl Gene ID:

ENSAPLG00000005026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005259

4994699 - 5051805

57107