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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5049250_5049788_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5049250 - 5049788

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAGAT

U12 Branch Point Sequence:

GCTCTTGCAACA

Flanking Amino Acid:

VDPYEEADAQVAAEREKAQQ

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

83.9

28.9

Major BPS

57.5

0.19

52.7

34.2

Major PPT

81.7

0.71

0.8

76.9

Minor 5ss

30.4

-2.2

3.2

46.4

Minor BPS

43.1

-0.5

2.1

52.9

39.6

Associated Gene:

Gene:

PPIL2

Ensembl Gene ID:

ENSAPLG00000005026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005259

4994699 - 5051805

57107