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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5118108_5119546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5118108 - 5119546

Intron Length:

1439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGACA

5'SS Class:

strong_major

3'SS Sequence:

CTATATTATTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

AAATAAATAACA

Flanking Amino Acid:

LEQYYDPSDEPVAEAPFKFD

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.7

35.1

Major BPS

75.9

0.64

66.1

40.5

Major PPT

64.5

0.33

1.1

68.5

41.1

Minor 5ss

31.9

-2.1

3.1

40.7

45.3

Minor BPS

46.7

-0.2

60.09

38.2

Associated Gene:

Gene:

MAPK1

Ensembl Gene ID:

ENSAPLG00000006116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006355

5114645 - 5148604

33960