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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5198679_5199171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5198679 - 5199171

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACTT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TCTAACATAAAT

Flanking Amino Acid:

KFHYFVDSIAGMDELMEVSF

Intron Amino Acid Position:

602

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

77.9

36.7

Major BPS

80.4

0.76

80.3

31.8

Major PPT

82.7

0.74

0.8

77.3

30.7

Minor 5ss

37.2

-1.4

3.4

56.5

47.6

Minor BPS

49.5

0.04

1.9

72.49

43.4

Associated Gene:

Gene:

TOP3B

Ensembl Gene ID:

ENSAPLG00000005306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047638

5194199 - 5211210

17012

ENSAPLT00000005558

5196391 - 5211272

14882