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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5199322_5199566_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5199322 - 5199566

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTCTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTGCTGATATCT

Flanking Amino Acid:

IVLVHGYYKIDAELVLPTIR

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.3

74.1

38.3

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

70.3

0.46

70.2

41.3

Minor 5ss

28.9

-2.4

2.6

32.6

Minor BPS

42.3

-0.5

2.4

65.69

44.8

Associated Gene:

Gene:

TOP3B

Ensembl Gene ID:

ENSAPLG00000005306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047638

5194199 - 5211210

17012

ENSAPLT00000005558

5196391 - 5211272

14882