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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5202887_5203191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5202887 - 5203191

Intron Length:

305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TACCCCTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TCTCTCATACCC

Flanking Amino Acid:

EMLRVASAALGMGPQHAMQI

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

84.6

0.86

41.2

Major PPT

75.5

0.57

0.8

72.7

31.6

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

-0

1.9

64.12

41.4

Associated Gene:

Gene:

TOP3B

Ensembl Gene ID:

ENSAPLG00000005306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047638

5194199 - 5211210

17012

ENSAPLT00000005558

5196391 - 5211272

14882