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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5205561_5206003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5205561 - 5206003

Intron Length:

443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACAGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGTTCCTGTATT

Flanking Amino Acid:

LDLRIGCAFTRFQTKYFQGK

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

64.8

35.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

91.3

0.93

0.5

92.5

17.5

Minor 5ss

30.8

-2.2

3.3

39.5

45.9

Minor BPS

62.7

0.48

1.8

81.84

39.3

Associated Gene:

Gene:

TOP3B

Ensembl Gene ID:

ENSAPLG00000005306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047638

5194199 - 5211210

17012

ENSAPLT00000005558

5196391 - 5211272

14882