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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5206201_5207130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5206201 - 5207130

Intron Length:

930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGATCTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTCAATTACTT

Flanking Amino Acid:

DKEGENICFEVLDAVLPVMN

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.4

26.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

69.4

0.44

69.9

41.2

Minor 5ss

45.6

-0.5

3.1

65.7

39.5

Minor BPS

49.3

0.03

75.83

40.6

Associated Gene:

Gene:

TOP3B

Ensembl Gene ID:

ENSAPLG00000005306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047638

5194199 - 5211210

17012

ENSAPLT00000005558

5196391 - 5211272

14882