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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5207206_5208598_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5207206 - 5208598

Intron Length:

1393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

ATTTCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ATTTCTTTCACA

Flanking Amino Acid:

PKLSMVKFLQVEGRGCDCIV

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.5

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

85.1

0.79

0.7

80.2

31.2

Minor 5ss

70.5

0.69

2.2

81.8

38.5

Minor BPS

71.2

0.66

1.7

81.43

Associated Gene:

Gene:

TOP3B

Ensembl Gene ID:

ENSAPLG00000005306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047638

5194199 - 5211210

17012

ENSAPLT00000005558

5196391 - 5211272

14882