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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5209864_5210528_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5209864 - 5210528

Intron Length:

665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGAGAG

5'SS Class:

major

3'SS Sequence:

CTTATTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTTATGATCT

Flanking Amino Acid:

AQSIAKILSRGNMSSRKGLN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

56.9

42.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.74

0.8

76.7

31.9

Minor 5ss

27.9

-2.5

3.5

43.6

Minor BPS

49.8

0.07

75.25

40.9

Associated Gene:

Gene:

TOP3B

Ensembl Gene ID:

ENSAPLG00000005306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047638

5194199 - 5211210

17012

ENSAPLT00000005558

5196391 - 5211272

14882