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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5290221_5290351_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5290221 - 5290351

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCCTTTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

60.4

45.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.65

73.9

41.3

Minor 5ss

24.7

-2.9

29.5

43.3

Minor BPS

57.4

0.31

1.6

70.13

42.3

Associated Gene:

Gene:

YDJC

Ensembl Gene ID:

ENSAPLG00000004894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005036

5290193 - 5303877

13685