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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5351710_5356222_R

Intron Information:

Intron Rank:

133423

Intron Class:

major

Intron Phase:

Intron Coordinates:

5351710 - 5356222

Intron Length:

4513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCACA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTGAC

U12 Branch Point Sequence:

TTGGGGGGGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

40.2

Major BPS

48.9

-0

1.3

40.5

41.4

Major PPT

84.1

0.77

0.8

76.2

37.8

Minor 5ss

38.3

-1.3

3.1

49.3

46.7

Minor BPS

32.8

-1.2

2.7

54.85

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041727

5349710 - 5357202

7493

ENSAPLT00000024297

5351649 - 5357202

5554