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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5353904_5356222_R

Intron Information:

Intron Rank:

133422

Intron Class:

major

Intron Phase:

Intron Coordinates:

5353904 - 5356222

Intron Length:

2319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCACA

5'SS Class:

strong_major

3'SS Sequence:

TCCCATAACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTTCCCATAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

40.2

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

63.9

0.31

57.5

36.1

Minor 5ss

38.3

-1.3

3.1

49.3

46.7

Minor BPS

0.78

1.6

86.46

31.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019784

5353823 - 5357202

3380