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Intron Name: Anas_platyrhynchos_platyrhynchos_16_54488_55183_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
54488 - 55183

Intron Length:
696

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGTTTT

5'SS Class:
strong_major

3'SS Sequence:
TGTATCCCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATAACAT

U12 Branch Point Sequence:
AATGCCTTCAGG

Flanking Amino Acid:
LSRIVPLREKKGLPLKLIIM

Intron Amino Acid Position:
392

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
99.2
1.16
0.6
97
9.5

Major BPS
62.2
0.3
1.1
69.4
35.8

Major PPT
77.5
0.62
0.9
70.5
36.1

Minor 5ss
46.1
-0.4
2.8
66.9
44.4

Minor BPS
47
-0.3
2.2
54.53
46.4

Associated Gene:

Gene:
DHX37

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43730 - 60314
16585