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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5553181_5554021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5553181 - 5554021

Intron Length:

841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCATATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTTTTTGCATA

Flanking Amino Acid:

CFRGQTIKLLKHRFSPNMTE

Intron Amino Acid Position:

2079

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

71.6

40.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

78.5

0.64

0.9

73.9

35.9

Minor 5ss

35.3

-1.7

2.9

41.6

Minor BPS

51.8

0.05

1.8

71.08

35.7

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427