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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5558899_5559693_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5558899 - 5559693

Intron Length:

795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

TTGTTCTCAGCT

Flanking Amino Acid:

SALSEVKVQPGCYLPSNPEA

Intron Amino Acid Position:

1794

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

77.2

37.6

Major BPS

0.52

1.5

79.6

35.6

Major PPT

88.8

0.87

0.7

84.2

30.4

Minor 5ss

35.3

-1.7

3.1

46.5

42.9

Minor BPS

0.39

1.8

79.85

42.3

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427