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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5559765_5561354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5559765 - 5561354

Intron Length:

1590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

TATCGTTTATCT

Flanking Amino Acid:

NKITNVSAIIKPFPKGDERK

Intron Amino Acid Position:

1770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

84.8

0.78

0.7

77.8

36.5

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

51.8

0.14

74.42

42.4

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427