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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5563918_5564702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5563918 - 5564702

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTGTG

5'SS Class:

major

3'SS Sequence:

CCTGCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATGTGTTTGACC

Flanking Amino Acid:

AVSDVPEAIKYLVTWHTIDA

Intron Amino Acid Position:

1613

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

70.7

39.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.9

0.7

0.8

72.1

37.9

Minor 5ss

42.5

-0.8

3.1

57.9

46.8

Minor BPS

57.2

0.21

1.8

67.26

39.1

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427