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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5564794_5565528_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5564794 - 5565528

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TGGTTATATGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AATTTTCTAATA

Flanking Amino Acid:

SPHLAVQLPTRFKNTEAIGT

Intron Amino Acid Position:

1582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

68.4

0.42

63.5

42.2

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

57.1

0.22

1.6

67.05

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427