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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5565723_5565868_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5565723 - 5565868

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CGGTTTCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

TCTTCCAGAAAA

Flanking Amino Acid:

KRRTLLLSLLATEIERLITW

Intron Amino Acid Position:

1518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

54.4

0.11

61.4

34.3

Major PPT

72.5

0.51

0.9

69.6

36.8

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

55.1

0.16

1.9

70.95

40.5

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427