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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5565949_5566769_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5565949 - 5566769

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTTTATCC

Flanking Amino Acid:

YLTASQLVPPGMSKKTNRGT

Intron Amino Acid Position:

1451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.8

0.58

74.9

33.8

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

64.4

0.43

1.6

73.08

38.7

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341