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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5566690_5566769_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5566690 - 5566769

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCGTTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TGTTCCGTTATT

Flanking Amino Acid:

YLTASQLVPPDNQDTRSNLD

Intron Amino Acid Position:

1451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

70.2

0.5

1.1

77.2

Major PPT

68.1

0.41

66.7

39.3

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

55.4

0.25

2.3

80.7

41.2

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003258

5550857 - 5610283

59427