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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5568426_5568675_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5568426 - 5568675

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

AAAACATCAAAG

Flanking Amino Acid:

EVTPHYIWIEFLVQRFEIAK

Intron Amino Acid Position:

1322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.8

88.7

25.2

Major BPS

54.4

0.11

61.4

34.3

Major PPT

82.6

0.73

0.8

73.6

36.9

Minor 5ss

42.3

-0.8

2.8

59.2

45.4

Minor BPS

42.9

-0.6

1.9

44.57

39.9

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003258

5550857 - 5610283

59427

ENSAPLT00000031384

5550943 - 5610283

59341