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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5568835_5569990_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5568835 - 5569990

Intron Length:

1156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGAAGC

5'SS Class:

major

3'SS Sequence:

TTTGTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

AATGCTGTAACC

Flanking Amino Acid:

LAAKNGIEVPFMREMAGAWQ

Intron Amino Acid Position:

1269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

61.1

43.9

Major BPS

74.6

0.61

65.6

41.4

Major PPT

92.4

0.95

0.7

88.3

28.9

Minor 5ss

32.9

-1.9

3.2

43.8

Minor BPS

51.6

0.03

2.1

65.46

40.4

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427