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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5570119_5570362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5570119 - 5570362

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTCTGCTGAAGA

Flanking Amino Acid:

KLTALLISSKDSDPQLLHHL

Intron Amino Acid Position:

1226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

76.8

33.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

0.83

0.8

84.6

Minor 5ss

31.6

-2.1

3.1

39.6

45.9

Minor BPS

49.8

-0

2.2

67.78

44.7

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427