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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5570962_5571847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5570962 - 5571847

Intron Length:

886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

GTTCTGGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAA

U12 Branch Point Sequence:

ACAGTATAAACA

Flanking Amino Acid:

GYNRQNTTLGATQLTERPTC

Intron Amino Acid Position:

1143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.3

77.8

38.7

Major BPS

66.7

0.41

57.8

Major PPT

71.1

0.48

41.6

Minor 5ss

37.2

-1.5

2.9

46.9

41.8

Minor BPS

44.1

-0.4

1.9

50.86

40.7

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427