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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5571968_5573117_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5571968 - 5573117

Intron Length:

1150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGAGC

5'SS Class:

major

3'SS Sequence:

TTGTGTACATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AATTTTTCAACA

Flanking Amino Acid:

APSVTKSHLQEYLNKHQNWV

Intron Amino Acid Position:

1103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

65.8

39.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

69.8

0.45

68.2

42.2

Minor 5ss

27.2

-2.6

34.5

41.4

Minor BPS

63.3

0.41

1.5

70.87

34.9

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427