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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5573208_5573630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5573208 - 5573630

Intron Length:

423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTGTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTTACTGATGT

Flanking Amino Acid:

TVPDTHEARESIVKDFAARC

Intron Amino Acid Position:

1073

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

44.5

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

82.4

0.73

0.9

81.2

36.5

Minor 5ss

39.7

-1.2

3.2

57.4

46.9

Minor BPS

49.4

0.03

2.2

78.01

43.9

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427