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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5573715_5574414_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5573715 - 5574414

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

TGTTTTTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTATTGAAAC

Flanking Amino Acid:

LQTLSLSLSADIHKDQPYYD

Intron Amino Acid Position:

1045

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.6

34.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

81.1

0.7

0.9

81.2

36.5

Minor 5ss

38.5

-1.3

3.3

54.7

43.6

Minor BPS

58.5

0.25

1.7

73.84

36.2

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427