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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5578117_5590877_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5578117 - 5590877

Intron Length:

12761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGATTTTAATA

Flanking Amino Acid:

LGVLIPVIAVLTRRLPPIKE

Intron Amino Acid Position:

798

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.8

83.1

28.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.8

0.6

0.9

77.9

35.9

Minor 5ss

-1.7

2.8

42.6

38.5

Minor BPS

59.8

0.3

1.3

62.67

38.6

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427