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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5596884_5598357_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5596884 - 5598357

Intron Length:

1474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTATTCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ATTTCTGTACTC

Flanking Amino Acid:

LYKYHSQYHTVGGNDIKISV

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.3

39.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

75.4

0.57

0.8

73.7

35.9

Minor 5ss

37.6

-1.4

3.2

48.7

47.5

Minor BPS

49.3

-0

2.2

67.85

38.7

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427