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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5598488_5599178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5598488 - 5599178

Intron Length:

691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTCTT

5'SS Class:

major

3'SS Sequence:

GTTTTGCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TGCTATATAATG

Flanking Amino Acid:

HLPLLICCLQGLGRLCERFP

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.3

74.4

41.9

Major BPS

0.72

78.4

31.2

Major PPT

80.3

0.68

0.8

77.9

36.6

Minor 5ss

41.7

-0.9

2.9

59.1

45.3

Minor BPS

47.6

-0.3

1.8

53.75

41.5

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427