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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5600248_5600544_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5600248 - 5600544

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAGAAT

5'SS Class:

major

3'SS Sequence:

TTTATTTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATTT

Flanking Amino Acid:

MLRDTLYYMKDLPTSFVKEI

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

73.7

36.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.3

0.82

0.7

85.7

28.8

Minor 5ss

39.4

-1.2

3.3

56.4

Minor BPS

63.6

0.51

1.5

78.46

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003258

5550857 - 5610283

59427

ENSAPLT00000031384

5550943 - 5610283

59341