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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5602272_5604053_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5602272 - 5604053

Intron Length:

1782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTGATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ACTTCTTTATTT

Flanking Amino Acid:

PGGSAIHYFEGSYLPDGSAL

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.4

23.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

83.7

0.76

0.9

85.7

33.5

Minor 5ss

41.2

-1

57.8

46.8

Minor BPS

65.5

0.56

1.5

77.64

39.7

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427