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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5608487_5610064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5608487 - 5610064

Intron Length:

1578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

CGCTGTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TGTTCTCCCATC

Flanking Amino Acid:

AVQNPAPLEKVQKLLCMCPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.7

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

79.2

0.66

0.9

75.9

Minor 5ss

30.2

-2.3

3.3

36.8

47.7

Minor BPS

-0.4

2.1

59.85

39.7

Associated Gene:

Gene:

PI4KA

Ensembl Gene ID:

ENSAPLG00000003021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031384

5550943 - 5610283

59341

ENSAPLT00000003258

5550857 - 5610283

59427