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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5612065_5613017_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5612065 - 5613017

Intron Length:

953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTATTACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGTATTTTAATT

Flanking Amino Acid:

NGTPEYYGNSRLKEAMMSSK

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.6

0.69

0.9

74.6

39.1

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

65.8

0.57

1.2

75.27

35.5

Associated Gene:

Gene:

SNAP29

Ensembl Gene ID:

ENSAPLG00000002820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002849

5610359 - 5616439

6081