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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5614280_5616281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5614280 - 5616281

Intron Length:

2002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

ACTGCTTTGAAT

Flanking Amino Acid:

AYHQKIDNNLDEMSSGLSRL

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

22.1

Major BPS

74.6

0.61

1.4

34.5

Major PPT

75.3

0.57

71.5

38.4

Minor 5ss

-2.1

3.1

39.9

46.1

Minor BPS

56.2

0.28

1.6

69.81

41.5

Associated Gene:

Gene:

SNAP29

Ensembl Gene ID:

ENSAPLG00000002820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002849

5610359 - 5616439

6081