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Intron Name: Anas_platyrhynchos_platyrhynchos_16_564047_564464_F

Intron Information:

Intron Rank:

136190

Intron Class:

major

Intron Phase:

Intron Coordinates:

564047 - 564464

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TCCCTCTGCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

77.4

0.62

0.9

73.5

35.7

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

45.8

-0.2

1.9

61.15

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018989

563271 - 564945

1675