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Intron Name: Anas_platyrhynchos_platyrhynchos_16_56445_57184_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
56445 - 57184

Intron Length:
740

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGAGTC

5'SS Class:
strong_major

3'SS Sequence:
CTTGCCCTTTTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAAACAA

U12 Branch Point Sequence:
AACAGCCAAACA

Flanking Amino Acid:
PQFLYEAGYTSSNGTIGITE

Intron Amino Acid Position:
290

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.1
0.76
1
73.3
36.4

Major BPS
48.1
-0.1
0.9
53.4
30.8

Major PPT
76.9
0.61
0.8
73.9
31.2

Minor 5ss
33.6
-1.9
3.7
49.4
47.1

Minor BPS
39.8
-0.7
2.2
48.31
41.8

Associated Gene:

Gene:
DHX37

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43730 - 60314
16585