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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5651278_5651923_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5651278 - 5651923

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTG

5'SS Class:

strong_major

3'SS Sequence:

CTGAAATCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TCTTTCTGAAAT

Flanking Amino Acid:

FQKIVLYAKKVGYTPDWIFL

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

75.1

41.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

62.1

0.27

51.8

42.6

Minor 5ss

37.2

-1.4

3.1

49.5

46.7

Minor BPS

66.8

0.6

1.5

81.8

39.4

Associated Gene:

Gene:

CLTCL1

Ensembl Gene ID:

ENSAPLG00000000990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031604

5634134 - 5669742

35609

ENSAPLT00000044423

5634134 - 5669742

35609

ENSAPLT00000028521

5634134 - 5669742

35609

ENSAPLT00000038941

5634134 - 5669638

35505

ENSAPLT00000019544

5634134 - 5669742

35609

ENSAPLT00000035477

5634134 - 5669638

35505

ENSAPLT00000001277

5634134 - 5668999

34866

ENSAPLT00000034506

5634134 - 5669742

35609

ENSAPLT00000045287

5634134 - 5669742

35609