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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5653637_5654006_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5653637 - 5654006

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAGTAT

5'SS Class:

major

3'SS Sequence:

TGACTCTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CACCTTTTAACT

Flanking Amino Acid:

ELFESFKSYEGLFYFLGSIV

Intron Amino Acid Position:

710

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

70.7

35.5

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

74.2

0.55

0.9

66.1

40.6

Minor 5ss

43.8

-0.7

3.3

63.6

48.1

Minor BPS

62.5

0.47

1.3

69.58

41.7

Associated Gene:

Gene:

CLTCL1

Ensembl Gene ID:

ENSAPLG00000000990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019544

5634134 - 5669742

35609

ENSAPLT00000035477

5634134 - 5669638

35505

ENSAPLT00000001277

5634134 - 5668999

34866

ENSAPLT00000034506

5634134 - 5669742

35609

ENSAPLT00000045287

5634134 - 5669742

35609

ENSAPLT00000031604

5634134 - 5669742

35609

ENSAPLT00000044423

5634134 - 5669742

35609

ENSAPLT00000028521

5634134 - 5669742

35609

ENSAPLT00000038941

5634134 - 5669638

35505