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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5655043_5655360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5655043 - 5655360

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TGGCTTATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGCTAATAACT

Flanking Amino Acid:

QKYIEIYVQKVNPSRIPAVV

Intron Amino Acid Position:

807

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.2

0.48

0.9

62.9

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

48.9

-0

1.9

70.03

40.3

Associated Gene:

Gene:

CLTCL1

Ensembl Gene ID:

ENSAPLG00000000990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019544

5634134 - 5669742

35609

ENSAPLT00000035477

5634134 - 5669638

35505

ENSAPLT00000001277

5634134 - 5668999

34866

ENSAPLT00000034506

5634134 - 5669742

35609

ENSAPLT00000045287

5634134 - 5669742

35609

ENSAPLT00000031604

5634134 - 5669742

35609

ENSAPLT00000044423

5634134 - 5669742

35609

ENSAPLT00000028521

5634134 - 5669742

35609

ENSAPLT00000038941

5634134 - 5669638

35505