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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5663358_5663737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5663358 - 5663737

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATCTTAATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

AATATCTTAATT

Flanking Amino Acid:

HTRTVNFFSKVNQLLLVKPY

Intron Amino Acid Position:

1442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.7

83.9

30.3

Major BPS

0.82

0.8

24.9

Major PPT

76.8

0.6

0.9

67.4

42.2

Minor 5ss

38.4

-1.3

2.9

48.7

47.5

Minor BPS

71.9

0.77

1.2

80.16

35.3

Associated Gene:

Gene:

CLTCL1

Ensembl Gene ID:

ENSAPLG00000000990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031604

5634134 - 5669742

35609

ENSAPLT00000044423

5634134 - 5669742

35609

ENSAPLT00000028521

5634134 - 5669742

35609

ENSAPLT00000038941

5634134 - 5669638

35505

ENSAPLT00000019544

5634134 - 5669742

35609

ENSAPLT00000035477

5634134 - 5669638

35505

ENSAPLT00000001277

5634134 - 5668999

34866

ENSAPLT00000034506

5634134 - 5669742

35609

ENSAPLT00000045287

5634134 - 5669742

35609