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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5664609_5665410_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5664609 - 5665410

Intron Length:

802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

TCAAGCTTAACT

Flanking Amino Acid:

ELCKKDHLYKDAMQYAAESK

Intron Amino Acid Position:

1536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

83.1

0.75

0.7

76.9

31.9

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

63.3

0.5

1.9

77.57

44.5

Associated Gene:

Gene:

CLTCL1

Ensembl Gene ID:

ENSAPLG00000000990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031604

5634134 - 5669742

35609

ENSAPLT00000044423

5634134 - 5669742

35609

ENSAPLT00000028521

5634134 - 5669742

35609

ENSAPLT00000038941

5634134 - 5669638

35505

ENSAPLT00000019544

5634134 - 5669742

35609

ENSAPLT00000035477

5634134 - 5669638

35505

ENSAPLT00000001277

5634134 - 5668999

34866

ENSAPLT00000034506

5634134 - 5669742

35609

ENSAPLT00000045287

5634134 - 5669742

35609