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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5668598_5668964_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5668598 - 5668964

Intron Length:

367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTGAA

5'SS Class:

major

3'SS Sequence:

CTCTTCCAAGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

GCTCTTCCAAGT

Flanking Amino Acid:

QVTEPTPIVFERQTGFLVHP

Intron Amino Acid Position:

1642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.3

35.8

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

66.3

0.37

0.9

63.6

31.7

Minor 5ss

30.7

-2.2

3.4

36.2

43.3

Minor BPS

40.4

-0.6

1.9

54.39

41.4

Associated Gene:

Gene:

CLTCL1

Ensembl Gene ID:

ENSAPLG00000000990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001277

5634134 - 5668999

34866