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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5705796_5706607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5705796 - 5706607

Intron Length:

812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

ATGGCGCTGACC

Flanking Amino Acid:

RPLQDSPSWLDARFPWPMRL

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.4

40.3

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

82.5

0.73

0.7

76.4

25.6

Minor 5ss

-2.2

2.9

34.5

Minor BPS

43.2

-0.5

2.4

56.4

42.5

Associated Gene:

Gene:

DGCR2

Ensembl Gene ID:

ENSAPLG00000015913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032200

5705498 - 5707856

2359