Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_5707696_5707849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5707696 - 5707849

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGCGGC

5'SS Class:

major

3'SS Sequence:

TCCCCTCGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTCAC

U12 Branch Point Sequence:

GGTTCGTTCACG

Flanking Amino Acid:

KILDEDAYIESLEKIIQRDF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

57.7

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

70.4

0.46

0.9

68.9

31.6

Minor 5ss

30.2

-2.3

3.4

41.2

45.5

Minor BPS

48.3

-0.2

2.5

60.81

46.6

Associated Gene:

Gene:

DGCR2

Ensembl Gene ID:

ENSAPLG00000015913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016600

5707271 - 5770601

63331