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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5759594_5762209_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5759594 - 5762209

Intron Length:

2616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTTC

5'SS Class:

strong_major

3'SS Sequence:

CATCTTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATGCAT

U12 Branch Point Sequence:

CTTACACCAATG

Flanking Amino Acid:

LEGHWEVAYKGSSEVFLPPD

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.2

39.3

Major BPS

58.4

0.21

1.3

69.4

37.7

Major PPT

73.6

0.53

0.9

65.4

40.8

Minor 5ss

-0.3

3.1

66.9

44.7

Minor BPS

42.1

-0.7

2.1

50.57

43.4

Associated Gene:

Gene:

DGCR2

Ensembl Gene ID:

ENSAPLG00000015913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016600

5707271 - 5770601

63331