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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5762387_5764309_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5762387 - 5764309

Intron Length:

1923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

ATTTCTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TGGATATTGATG

Flanking Amino Acid:

YEKSSFLCKRSQTCVDIKDN

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

63.4

43.8

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

0.63

0.9

70.2

40.7

Minor 5ss

40.9

-1

2.8

45.8

43.4

Minor BPS

-0.4

1.7

48.33

39.3

Associated Gene:

Gene:

DGCR2

Ensembl Gene ID:

ENSAPLG00000015913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016600

5707271 - 5770601

63331